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Light

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  • Data repository for the paper: "The roles of sea-ice, light and sedimentation in structuring shallow Antarctic benthic communities" Graeme F. Clark, Jonathan S. Stark, Anne S. Palmer, Martin J. Riddle, Emma L. Johnston. PLoS ONE Data are boulder communities (epifauna), annual light budgets, and sediment traps. See the paper for more details. ABSTRACT On polar coasts, seasonal sea-ice duration strongly influences shallow marine environments by affecting environmental conditions, such as light, sedimentation, and physical disturbance. Sea-ice dynamics are changing in response to climate, but there is limited understanding of how this might affect shallow marine environments and benthos. Here we present a unique set of physical and biological data from a single region of Antarctic coast, and use it to gain insights into factors shaping polar benthic communities. At sites encompassing a gradient of sea-ice duration, we measured temporal and spatial variation in light and sedimentation and hard-substrate communities at different depths and substrate orientations. Biological trends were highly correlated with sea-ice duration, and appear to be driven by opposing gradients in light and sedimentation. As sea-ice duration decreased, there was increased light and reduced sedimentation, and concurrent shifts in community structure from invertebrate to algal dominance. Trends were strongest on shallower, horizontal surfaces, which are most exposed to light and sedimentation. Depth and substrate orientation appear to mediate exposure of benthos to these factors, thereby tempering effects of sea-ice and increasing biological heterogeneity. However, while light and sedimentation both varied spatially with sea-ice, their dynamics differed temporally. Light was sensitive to the site-specific date of sea-ice breakout, whereas sedimentation fluctuated at a regional scale coincident with the summer phytoplankton bloom. Sea-ice duration is clearly the overarching force structuring these shallow Antarctic benthic communities, but direct effects are imposed via light and sedimentation, and mediated by habitat characteristics. Data files: Boulder_community_data.csv - Percentage cover data for sessile organisms (invertebrates and algae) growing on boulder surfaces. - Columns 1 to 5 are sample attributes, columns 6 to 57 are measured variables (species or bare space). Light_budget_data.csv - Annual light budgets at each site, recorded by light metres. - Columns are site name and annual light budget (mol photons m-2 year-1) Sediment_trap_data.csv - Total sediment collected in sediment traps - Columns are site label, position in bay, replicate, dates deployed and retrieved, and the calculated sediment flux (g m-2 d-1)

  • Some ecosystems can undergo abrupt transformation in response to relatively small environmental change. Identifying imminent "tipping points" is crucial for biodiversity conservation, particularly in the face of climate change. Here we describe a tipping point mechanism likely to induce widespread regime shifts in polar ecosystems. Seasonal snow and ice cover periodically block sunlight reaching polar ecosystems, but the effect of this on annual light depends critically on the timing of cover within the annual solar cycle. At high latitudes sunlight is strongly seasonal, and ice-free days around the summer solstice receive orders of magnitude more light than those in winter. Early melt that brings the date of ice-loss closer to midsummer will cause an exponential increase in the amount of sunlight reaching some areas per year. This is likely to drive ecological tipping points in which primary producers (plants and algae) flourish and out-compete dark-adapted communities. We demonstrate this principle on Antarctic shallow seabed ecosystems, which our data suggest are sensitive to small changes in the timing of sea-ice loss. Algae respond to light thresholds that are easily exceeded by a slight reduction in sea-ice duration. Earlier sea-ice loss is likely to cause extensive regime-shifts in which endemic shallow-water invertebrate communities are replaced by algae, reducing coastal biodiversity and fundamentally changing ecosystem functioning. Modeling shows that recent changes in ice and snow cover have already transformed annual light budgets in large areas of the Arctic and Antarctic, and both aquatic and terrestrial ecosystems are likely to experience further significant change in light. The interaction between ice loss and solar irradiance renders polar ecosystems acutely vulnerable to abrupt ecosystem change, as light-driven tipping points are readily breached by relatively slight shifts in the timing of snow and ice loss. This archive contains data and statistical code for the article: Graeme F. Clark, Jonathan S. Stark, Emma L. Johnston, John W. Runcie, Paul M. Goldsworthy, Ben Raymond and Martin J. Riddle (2013) Light-driven tipping points in polar ecosystems. Global Change Biology Data and code are organised into folders according to figures in the article. See the article for a full description of methods. Statistical code was written in R v. 2.15.0. In data files, rows are samples and columns are variables. Details for numerical variables in each data file are listed below. Figures 7 and 8 were made in MATLAB and code is not provided. Figure 1: rad_data.csv Solar irradiance data derived from: Suri M, Hofierja J (2004) A new GIS-based solar radiation model and its application to photovoltaic assessments. Transactions in GIS 8: 175-190. Figure 2: Fig. 2c.1.csv Light: Measured light at the seabed per day (mol photons m-2 d-1). Figure 2: Fig. 2c.2.csv Light: Measured light at the seabed per day (mol photons m-2 d-1). Light.mod.p: Light at the seabed per day (mol photons m-2 d-1) predicted from modeled seasonal variation. Figure 2: Fig. 2d.csv Light: Measured light at the seabed per day (mol photons m-2 d-1). Figure 3: Fig. 3a.csv Irradiance: Mean irradiance (micro mol photons m-2 s-1). P/R: Productivity/respiration ratios (micro mol photons O2-1 gFW-1 h-1). Figure 3: Fig. 3b.csv Light: Mean irradiance (micro mol photons m-2 s-1) in experimental treatments. Growth: Thallus growth (mm) of Palmaria decipiens under experimental treatments. Figure 3: Fig. 3c.csv Des, Him, Irr, Pal: Ice-free days required for minimum annual light budget Figure 3: Fig. 3c.bars.csv Prop: relative cover (sums to 1 per site) of algae and invertebrates, excluding Inversiula nutrix and Spirorbis nordenskjoldi. Figure 4: Fig. 4.csv Time: months after deployment Length: length of thalli (mm) Figure 5: Fig. 5c and d.csv Axis 1 and Axis 1: Values from first two axes of principal coordinate analysis IceCover: proportion of days that each site is free of sea-ice per year. Beta: Beta-diversity. Calculated as Jaccard similarity between the most ice-covered site (OB1) and each other site. Figure 5: Fig. 5e and f.csv IceCover: proportion of days that each site is free of sea-ice per year. Value: number of species per boulder (for Metric=Diversity), or percent cover per boulder (for Metric=Cover). Figure 6: Fig. 6a.csv Sites.lost: number of sites removed from dataset due to sea-ice loss. Ice: maximum ice-free days within the region (d yr-1). S: Total species richness across each subset of sites. Effort: relative sampling effort (number of sites sampled).