The data reports the pigment concentrations and results of CHEMTAX analysis for 2 summer seasons in Antarctic. In 2008/09 three experiments in which 6 x 650 l minicosms (polythene tanks) were used to incubate natural microbial communities (less than 200 um diameter) at a range of CO2 concentrations while maintained at constant light, temperature and mixing. The communities were pumped from ice-free water ~60 m offshore on 30/12/08, 20/01/09 and 09/02/09. These experiments received no acclimation to CO2 treatment. A further experiment was performed in 2014/15 using water helicoptered from ~ 1 km offshore amongst decomposing fast ice on 19/11/14. This experiment included a 5 day period during which the community was exposed top low light and the CO2 was gradually raised to the target value for each tank, followed by a two day period when the light was raised to an irradiance that was saturating but not inhibitory for photosynthesis. A range of coincident measurements were performed to quantify the structure and function of the microbial community (see Davidson et al. 2016 Mar Ecol Prog Ser 552: 93–113, doi: 10.3354/meps11742 and Thomson et al 2016 Mar Ecol Prog Ser 554: 51–69, 2016, doi: 10.3354/meps11803). The data provides a matrix of samples against component pigment concentration and the output from CHEMTAX that best explained the phytoplankton composition of the community based on the ratios of the component pigments. For the 2008/09 experiments, samples were obtained every 2 days for 10, 12 and 10 days in experiments 1, 2 and 3 respectively. In 2014/15 samples were obtained from each incubation tank on days 1,3, 5, and 8 during th acclimation period and every 2 days until day 18 thereafter. For each sample a measured volume was filtered through 13 mm Whatman GF/F filters for 20 mins. Filters were folded in half, blotted dry, and immediately frozen in liquid nitrogen for analysis in Australia. Pigments were extracted, analysed by HPLC, and quantified following the methods of Wright et al. (2010). Pigments (including Chl a) were extracted from filters with 300 micro l dimethylformamide plus 50 micro l methanol, containing 140 ng apo-8'-carotenal (Fluka) internal standard, followed by bead beating and centrifugation to separate the extract from particulate matter. Extracts (125 micro l) were diluted to 80% with water and analysed on a Waters HPLC using a Waters Symmetry C8 column and a Waters 996 photodiode array detector. Pigments were identified by comparing retention times and spectra to a mixed standard sample from known cultures (Jeffrey and Wright, 1997), run daily before samples. Peak integrations were performed using Waters Empower software, checked manually for corrections, and quantified using the internal standard method (Mantoura and Repeta, 1997).

Update - 2013-11-14 - data from the cruise now included in the download file. Two extra excel spreadsheets have been added to the download file - one is a summary file, and the other contains pigment data. Sampling sites with a list of activities at each site for the HIPPIES cruise of the Aurora Australis - December to January 2003-2004. Aurora V4 Tube Labelour use Sample#our use Date(UTC) Time(UTC)Shorthand entry code - ignore Time(UTC)Formatted Use this Long Degdegrees Long Minminutes Long Decdecimaldegrees Lat Degdegrees Lat Minminutes LatDecdecimaldegrees Local time (dec hrs)actual solar local time (decimal hours) calc from longitude DOES NOT EQUAL TIME ZONE Sea Temp Ice present/absent Lugol's#microscope sample number for phytoplankton ID (Our use only) HPLC Volvolume filtered for HPLC pigment analysis (Our use only) Cocco Volvolume filtered for coccolithophorid counts (Our use only) Cocco tray No.(Our use only) Location:DCM: Deep chlorophyll maximum Thermo: Thermocline

Sampling sites with a list of activities at each site for the Tangaroa cruise - March to April 2004. Tangaroa Tube Label our use Sample#our use Date(UTC) Time(UTC)Shorthand entry code - ignore Time(UTC)Formatted Use this Long Degdegrees Long Minminutes Long Decdecimaldegrees Lat Degdegrees Lat Minminutes Lat Decdecimaldegrees Local time (dec hrs)actual solar local time (decimal hours) calc from longitude DOES NOT EQUAL TIME ZONE Sea Temp Ice present/absent Lugol's#microscope sample number for phytoplankton ID (Our use only) HPLC Volvolume filtered for HPLC pigment analysis (Our use only) Cocco Volvolume filtered for coccolithophorid counts (Our use only) Cocco tray No.(Our use only) Location:DCM: Deep chlorophyll maximum Thermo: Thermocline

Locations of sampling sites for ASAC project 40 on voyage 4 of the Aurora Australis in the 2009/2010 season. Samples were collected during March of 2010. The final dataset will contain information on chlorophyll, carotenoids, coccolithophorids and species identification and counts. Public Summary from the project: This program ... aims to determine the role of single celled plants, animals, bacteria and viruses in Antarctic waters. We quantify their vital role as food for other organisms, their potential influence in moderating global climate change through absorption of CO2 and production of DMS, and determine their response to effect of climate change. For more information, see the other metadata records related to ASAC project 40 (ASAC_40). The fields in this dataset are: Tube Label Date (UTC) Time (UTC) Latitude Longitude Sea Temperature Ice (Presence or Absence) Lugols Bottle Fluorometer

Locations of sampling sites for ASAC project 40 on voyage 3 of the Aurora Australis in the 2006/2007 season. Samples were collected during January and February of 2007. The final dataset will contain information on chlorophyll, carotenoids, coccolithophorids and species identification and counts. Public Summary from the project: This program ... aims to determine the role of single celled plants, animals, bacteria and viruses in Antarctic waters. We quantify their vital role as food for other organisms, their potential influence in moderating global climate change through absorption of CO2 and production of DMS, and determine their response to effect of climate change. For more information, see the other metadata records related to ASAC project 40 (ASAC_40). The fields in this dataset are: Tube Label Date (UTC) Time (UTC) Latitude Longitude Sea Temperature Ice (Presence or Absence) Lugols Bottle Fluorometer

Locations of sampling sites for ASAC project 40 on voyage 6 of the Aurora Australis in the 1997/1998 season. Samples were collected during March of 1998. The final dataset will contain information on chlorophyll, carotenoids, coccolithophorids and species identification and counts. Public Summary from the project: This program ... aims to determine the role of single celled plants, animals, bacteria and viruses in Antarctic waters. We quantify their vital role as food for other organisms, their potential influence in moderating global climate change through absorption of CO2 and production of DMS, and determine their response to effect of climate change. For more information, see the other metadata records related to ASAC project 40 (ASAC_40). The fields in this dataset are: Tube Label Date (UTC) Time (UTC) Latitude Longitude Sea Temperature Ice (Presence or Absence) Lugols Bottle Fluorometer

This dataset contains locations of sampling sites for ASAC project 40 on rotation 2 of the French polar supply ship L'Astrolabe in the 2008/2009 season. Samples were collected during January of 2009. It also contains information on chlorophyll, carotenoids, coccolithophorids and species identification and counts. Public Summary from the project: ... This program aims to determine the role of single celled plants, animals, bacteria and viruses in Antarctic waters. We quantify their vital role as food for other organisms, their potential influence in moderating global climate change through absorption of CO2 and production of DMS, and determine their response to effect of climate change. For more information, see the other metadata records related to ASAC project 40 (ASAC_40). The fields in this dataset are: Tube Label Date (UTC) Time (UTC) Latitude Longitude Sea Temperature Ice (Presence or Absence) Coccolithophorid sample (yes or no) Plankton Net Sample Chlorophyll a (micro grams per litre)

This dataset contains the locations of sampling sites for ASAC project 40 on rotation 2 of the French polar supply ship L'Astrolabe in the 2002/2003 season. Samples were collected between December and January of 2002/2003. It also contains the final dataset which has information on chlorophyll, carotenoids, coccolithophorids and species identification and counts. Public Summary from the project: This program aims to determine the role of single celled plants, animals, bacteria and viruses in Antarctic waters. We quantify their vital role as food for other organisms, their potential influence in moderating global climate change through absorption of CO2 and production of DMS, and determine their response to effect of climate change. For more information, see the other metadata records related to ASAC project 40 (ASAC_40). The fields in this dataset are: Voyage Tube Label Date (UTC) Time (UTC) Time (Local) Nominal Depth (m) Latitude Longitude Sea Temperature Ice (Presence or Absence - 1 or 0 respectively) Coccolithophorid sample (yes or no) Plankton Net Sample Chlorophyll a (micro grams per litre)

This dataset contains the locations of sampling sites for ASAC project 40 on rotation 2 of the French polar supply ship L'Astrolabe in the 2003/2004 season. Samples were collected between January and February of 2004. It also contains the final dataset which has information on chlorophyll, carotenoids, coccolithophorids and species identification and counts. Public Summary from the project: This program aims to determine the role of single celled plants, animals, bacteria and viruses in Antarctic waters. We quantify their vital role as food for other organisms, their potential influence in moderating global climate change through absorption of CO2 and production of DMS, and determine their response to effect of climate change. For more information, see the other metadata records related to ASAC project 40 (ASAC_40). The fields in this dataset are: Tube Labelour use Sample#our use Date(UTC) Time(UTC)Shorthand entry code - ignore Time(UTC)FormattedUse this Long Degdegrees Long Minminutes LongDecdecimaldegrees Lat Degdegrees Lat Minminutes LatDecdecimaldegrees Local time (dec hrs)actual solar local time (decimal hours) calc from longitude DOES NOT EQUAL TIME ZONE Sea Temp Icepresent/absent Lugol's#microscope sample number for phytoplankton ID (Our use only) HPLC Volvolume filtered for HPLC pigment analysis (Our use only) Cocco Volvolume filtered for coccolithophorid counts (Our use only) Cocco tray No.(Our use only) Location:DCM: Deep chlorophyll maximum Thermo: Thermocline

This dataset contains the locations of sampling sites for ASAC project 40 on rotation 4 of the French polar supply ship L'Astrolabe in the 2005/2006 season. Samples were collected between February and March of 2006. It also contains the final dataset which has information on chlorophyll, carotenoids, coccolithophorids and species identification and counts. Public Summary from the project: This program aims to determine the role of single celled plants, animals, bacteria and viruses in Antarctic waters. We quantify their vital role as food for other organisms, their potential influence in moderating global climate change through absorption of CO2 and production of DMS, and determine their response to effect of climate change. For more information, see the other metadata records related to ASAC project 40 (ASAC_40).