Biodiversity and ecophysiology of Antarctic sea-ice bacteria

The data set includes information relevant for the study and description of sea-ice bacteria contains the following dataset subgroups and is organised by REFERENCE number.


1) Isolation data: strain designations (e.g. culture collection names are indicated for type cultures); media used for isolation and routine cultivation; temperature used for incubation; any special conditions (e.g. enrichment conditions) used for isolation; isolation site and type (e.g. sea-ice); availability of the indicated strain from the chief investigator (J. Bowman)


2) Phenotypic data: Includes morphological, physiological and biochemical tests performed. Details on how these were performed are indicated in the relevant reference.


3) Growth/temperature data: data for temperature related growth curves are given where available. Methods are indicated in the associated reference.


4) Fatty acid/chemotaxonomy data: fatty acid and other related data are given where available. Methods are indicated in the associated reference.


5) Genotypic data: data for DNA-guanosine/cytosine-content and genomic DNA:DNA hybridization are shown where available. Methods are indicated in the associated reference.


6) Phylogenetic data: data for sequences are cross-referenced to the GenBank database. In some cases, aligned sequence datasets are available in FASTA format and can be viewed in the programs BIOEDIT (www.mbio.ncsu.edu/BioEdit/bioedit.html) or CLUSTAL W (www.ebi.ac.uk/clustalw).


7) Other related published references which are useful or relevant to the dataset e.g. related sequences published subsequent to the ASAC study

Simple

Identification info

Alternate title
Biodiversity and ecophysiology of Antarctic sea-ice bacteria
Date (Publication)
2002-10-17
Edition
1

Originator

Bowman, J.

Publisher

Australian Antarctic Data Centre

Principal investigator

BOWMAN, JOHN
School of Agricultural Science
University of Tasmania
Private Bag 54
Hobart
Tasmania
7001
Australia

Collaborator

BOWMAN, JOHN
School of Agricultural Science
University of Tasmania
Private Bag 54
Hobart
Tasmania
7001
Australia
Name
CAASM Metadata
Website
https://data.aad.gov.au/metadata/records/ASAC_1012

Status
Completed

Custodian

AU/AADC > Australian Antarctic Data Centre, Australia - AADC, DATA OFFICER (DATA CENTER CONTACT)
Australian Antarctic Division
203 Channel Highway
Kingston
Tasmania
7050
Australia
Topic category
  • Biota
  • Oceans

Extent

N
S
E
W


Extent

Description
Temporal Coverage

Temporal extent

TimePeriod
1996-07-01 1999-06-30
Title
Biodiversity and ecophysiology of bacteria associated with Antarctic sea ice
Date (Publication)
1997
Citation identifier
9

Author

Bowman, J.P., Brown, M.V., Nichols, D.S.
Name
Antarctic Science
Issue identification
2
Page
134-142
Title
Diversity and association of psychrophilic bacteria in Antarctic sea ice
Date (Publication)
1997
Citation identifier
63

Author

Bowman, J.P., McCammon, S.A., Brown, M.V., Nichols, D.S., McMeekin, T.A.
Name
Applied and Environmental Microbiology
Issue identification
8
Page
3068-3078
NASA/GCMD Earth Science Keywords
  • EARTH SCIENCE > CRYOSPHERE > SEA ICE > PACK ICE
  • EARTH SCIENCE > CRYOSPHERE > SEA ICE > POLYNYAS
  • EARTH SCIENCE > CRYOSPHERE > SEA ICE
  • EARTH SCIENCE > OCEANS > SEA ICE > ICE TYPES
  • EARTH SCIENCE > OCEANS > SEA ICE > PACK ICE
  • EARTH SCIENCE > OCEANS > SEA ICE
  • EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > BACTERIA/ARCHAEA > CYANOBACTERIA (BLUE-GREEN ALGAE)
  • EARTH SCIENCE > BIOSPHERE > ECOSYSTEMS > AQUATIC ECOSYSTEMS > PLANKTON
  • EARTH SCIENCE > OCEANS > OCEAN CHEMISTRY > PIGMENTS > CHLOROPHYLL
  • EARTH SCIENCE > BIOSPHERE > ECOSYSTEMS > MARINE ECOSYSTEMS > PELAGIC
  • EARTH SCIENCE > BIOSPHERE > ECOSYSTEMS > FRESHWATER ECOSYSTEMS > LAKE/POND
  • EARTH SCIENCE > BIOSPHERE > ECOLOGICAL DYNAMICS > ECOSYSTEM FUNCTIONS > BIOMASS DYNAMICS
  • EARTH SCIENCE > BIOSPHERE > ECOLOGICAL DYNAMICS > ECOSYSTEM FUNCTIONS > SECONDARY PRODUCTION
  • EARTH SCIENCE > BIOSPHERE > ECOLOGICAL DYNAMICS > COMMUNITY DYNAMICS > COMMUNITY STRUCTURE
Keywords
  • 16S RIBOSOMAL RNA GENE
  • ANTARCTICA
  • CELLULOPHAGA
  • FLAVOBACTERIUM
  • COLWELLIA
  • GLACIECOLA
  • GELIDIBACTER
  • HALOPHILIC BACTERIA
  • PHYLOGENY
  • POLYUNSATURATED FATTY ACIDS
  • PSEUDOALTEROMONAS
  • PSYCHROBACTER
  • PSYCHROFLEXUS
  • PSYCHROPHILIC BACTERIA
  • SEA ICE
  • PSYCHROSERPENS
  • SHEWANELLA
NASA/GCMD Earth Science Keywords
  • FLUORESCENCE MICROSCOPY
  • FSI > Filter Sampling Instrument
  • FLAME-IONIZATION DETECTOR
  • GAS CHROMATOGRAPHS
  • SPECTROPHOTOMETERS
  • TEMPERATURE PROFILERS
  • FLUOROMETERS
  • GC-MS > Gas Chromatograph/Mass Spectrometry
NASA/GCMD Earth Science Keywords
  • LABORATORY
NASA/GCMD Earth Science Keywords
  • AMD/AU
  • CEOS
  • AMD
NASA/GCMD Earth Science Keywords
  • CONTINENT > ANTARCTICA
  • CONTINENT > ANTARCTICA > Prydz Bay
  • CONTINENT > ANTARCTICA > Ellis Fjord
  • CONTINENT > ANTARCTICA > Long Fjord
  • CONTINENT > ANTARCTICA > Vestfold Hills
  • GEOGRAPHIC REGION > POLAR
  • VERTICAL LOCATION > SEA SURFACE

Resource constraints

Use limitation
This metadata record is publicly available.

Resource constraints

Access constraints
licence
Other constraints
The data are available from the databases indicated in the summary.

Resource constraints

File type
Portable Network Graphic
Linkage
Creative Commons by Attribution logo

Title
Attribution 4.0 International (CC BY 4.0)
Website
https://creativecommons.org/licenses/by/4.0/legalcode

Legal code for Creative Commons by Attribution 4.0 International license

Use constraints
licence
Other constraints
This data set conforms to the CCBY Attribution License (http://creativecommons.org/licenses/by/4.0/). Please follow instructions listed in the citation reference provided at http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=ASAC_1012 when using these data.
Language
English
Character encoding
UTF8

Distribution Information

Distributor

Distributor

AU/AADC > Australian Antarctic Data Centre, Australia - AADC, DATA OFFICER (DATA CENTER CONTACT)
Australian Antarctic Division
203 Channel Highway
Kingston
Tasmania
7050
Australia

Distributor

Fees
Free
Planned available datetime
2002-10-17T00:00:00
OnLine resource
GET DATA

Entrez Nucleotide Sequence Search - accession numbers required

OnLine resource
PROJECT HOME PAGE

Public information for ASAC project 1012

OnLine resource
VIEW RELATED INFORMATION

BIOEDIT Program

OnLine resource
VIEW RELATED INFORMATION

CLUSTAL W Program

OnLine resource
VIEW RELATED INFORMATION

Citation reference for this metadata record and dataset

Maintenance and update frequency
As needed
Maintenance note
2014-12-04 - record updated by Dave Connell - basic updates. 2019-04-02 - record updated by Dave Connell for ISO compliance.

Metadata

Metadata identifier
string/ASAC_1012

Language
English
Character encoding
UTF8

Author

BOWMAN, JOHN
School of Agricultural Science
University of Tasmania
Private Bag 54
Hobart
Tasmania
7001
Australia

Sponsor

Australian Antarctic Division

Owner

AADC

Type of resource

Resource scope
Dataset

Alternative metadata reference

Title
gov.nasa.gsfc.gcmd
Citation identifier
97f00283-3938-41fe-b818-ae5bcd6eaea2

Alternative metadata reference

Title
gov.nasa.gsfc.gcmd
Date (Last Revision)
2019-04-02T14:33:45

Identifier

Description
metadata.extraction_date

Alternative metadata reference

Title
gov.nasa.gsfc.gcmd
Citation identifier
8.6

Metadata linkage
http://data.aad.gov.au/metadata/records/ASAC_1012

Point of truth for the metadata record

Date info (Creation)
2002-10-17T00:00:00
Date info (Last Update)
2019-04-02

Metadata standard

Title
ISO 19115-3
Edition
2014
Other citation details
Version 1
Title
DIF to ISO 19115-1 Profile
 
 

Overviews

Spatial extent

N
S
E
W


Keywords


Provided by

Share on social sites

Access to the record in catalogue

Associated resources

Not available