TemperateReefBase Geonetwork Catalogue
Krill microbiome
Krill-associated bacterial communities characterised by high-throughput DNA sequencing of the 16S ribosomal RNA gene.
The data is decribed in 'Clarke LJ, Suter L, King R, Bissett A and Deagle BE (2019) Antarctic Krill Are Reservoirs for Distinct Southern Ocean Microbial Communities. Front. Microbiol. 9:3226. doi: 10.3389/fmicb.2018.03226' available here: https://www.frontiersin.org/articles/10.3389/fmicb.2018.03226/full
Simple
Identification info
- Alternate title
- Krill microbiome
- Date (Publication)
- 2019-04-09
- Edition
- 1
- Citation identifier
-
Dataset DOI
- Title
- Information and documentation - Digital object identifier system
- Date (Publication)
- 2012-04-23
- Citation identifier
- ISO 26324:2012
- Citation identifier
- doi:10.26179/5cac34bd3481b
Originator
Deagle, B.E., King, R., Clarke, L.
Publisher
Australian Antarctic Data Centre
Principal investigator
Principal investigator
Principal investigator
Collaborator
Collaborator
- Name
- CAASM Metadata
- Purpose
- To characterise the bacterial communities in different krill tissues, and compare them with those in the surrounding seawater.
- Status
- Completed
Custodian
AU/AADC > Australian Antarctic Data Centre, Australia - AADC, DATA OFFICER (DATA CENTER CONTACT)
Australian Antarctic Division
203 Channel Highway
Kingston
Tasmania
7050
Australia
- Topic category
-
- Biota
- Oceans
Extent
N
S
E
W
))
Extent
- Description
- Temporal Coverage
Temporal extent
- TimePeriod
- 2016-01-31 2016-02-19
Extent
- Description
- Vertical Extent - Depth
Vertical element
- Minimum value
- 0
- Maximum value
- 80
- Identifier
- urn:x-ogc:def:cs:EPSG:6498
- Name
- Vertical CS. Axis: depth (D). Orientation: down. UoM: m.
- Identifier
- urn:x-ogc:def:axis:EPSG:113
- Name
- depth
- Title
- Antarctic Krill Are Reservoirs for Distinct Southern Ocean Microbial Communities.
- Date (Publication)
- 2019
- Citation identifier
- 9
- Citation identifier
- doi:10.3389/fmicb.2018.03226
Author
Clarke LJ, Suter L, King R, Bissett A and Deagle BE
- Name
- Front. Microbiol.
- Issue identification
- 3226
- NASA/GCMD Earth Science Keywords
-
- EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/INVERTEBRATES > ARTHROPODS > CRUSTACEANS > EUPHAUSIIDS (KRILL)
- Keywords
-
- EUPHAUSIA SUPERBA
- MICROBIOME
- 16S RRNA
- ILLUMINA MISEQ
- NASA/GCMD Earth Science Keywords
-
- ADS > Automated DNA Sequencer
- NASA/GCMD Earth Science Keywords
-
- R/V AA > R/V Aurora Australis
- NASA/GCMD Earth Science Keywords
-
- AMD/AU
- AMD
- CEOS
- NASA/GCMD Earth Science Keywords
-
- GEOGRAPHIC REGION > POLAR
- OCEAN > SOUTHERN OCEAN > SOUTHERN KERGUELEN AXIS
Resource constraints
- Use limitation
- This metadata record is publicly available.
Resource constraints
- Access constraints
- licence
- Other constraints
- These data are publicly available for download from the provided URL.
Resource constraints
- File type
- Portable Network Graphic
- Title
- Attribution 4.0 International (CC BY 4.0)
- Website
-
https://creativecommons.org/licenses/by/4.0/legalcode
Legal code for Creative Commons by Attribution 4.0 International license
- Use constraints
- licence
- Other constraints
- This data set conforms to the CCBY Attribution License (http://creativecommons.org/licenses/by/4.0/). Please follow instructions listed in the citation reference provided at http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=AAS_4313_KRILL_MICROBIOME when using these data.
- Language
- English
- Character encoding
- UTF8
Distribution Information
Distributor
Distributor
AU/AADC > Australian Antarctic Data Centre, Australia - AADC, DATA OFFICER (DATA CENTER CONTACT)
Australian Antarctic Division
203 Channel Highway
Kingston
Tasmania
7050
Australia
Distributor
- Fees
- Free
- Planned available datetime
- 2019-04-09T00:00:00
- Units of distribution
- kb
- Transfer size
- 493
- Distribution format
-
- csv, text, fasta
- OnLine resource
-
GET DATA
Download the dataset
- OnLine resource
-
PROJECT HOME PAGE
Public information for AAS project AAS_4313
- OnLine resource
-
VIEW RELATED INFORMATION
Citation reference for this metadata record and dataset.
Resource lineage
- Statement
- Several fecal, stomach and digestive gland samples had low sequencing depth, and could have a high proportion of contaminant bacteria. See the article and supplementary material for more detail.
- Hierarchy level
- Dataset
- Maintenance and update frequency
- As needed
- Maintenance note
- 2019-04-09 - record created by Laurence Clarke.
Metadata
- Metadata identifier
- string/AAS_4313_KRILL_MICROBIOME
- Language
- English
- Character encoding
- UTF8
Author
Sponsor
Australian Antarctic Division
Owner
AADC
Type of resource
- Resource scope
- Dataset
Alternative metadata reference
- Title
- gov.nasa.gsfc.gcmd
- Citation identifier
- 659669a7-d11f-4057-865e-0b753ed217b4
Alternative metadata reference
- Title
- gov.nasa.gsfc.gcmd
- Date (Last Revision)
- 2019-04-09T15:53:25
Identifier
- Description
- metadata.extraction_date
Alternative metadata reference
- Title
- gov.nasa.gsfc.gcmd
- Citation identifier
- 8.6
- Metadata linkage
-
http://data.aad.gov.au/metadata/records/AAS_4313_KRILL_MICROBIOME
Point of truth for the metadata record
- Date info (Creation)
- 2019-04-09T00:00:00
- Date info (Last Update)
- 2019-04-09
Metadata standard
- Title
- ISO 19115-3
- Edition
- 2014
- Other citation details
- Version 1
- Title
- DIF to ISO 19115-1 Profile
Overviews
Spatial extent
N
S
E
W
Provided by
Associated resources
Not available