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Krill microbiome

Krill-associated bacterial communities characterised by high-throughput DNA sequencing of the 16S ribosomal RNA gene.

The data is decribed in 'Clarke LJ, Suter L, King R, Bissett A and Deagle BE (2019) Antarctic Krill Are Reservoirs for Distinct Southern Ocean Microbial Communities. Front. Microbiol. 9:3226. doi: 10.3389/fmicb.2018.03226' available here: https://www.frontiersin.org/articles/10.3389/fmicb.2018.03226/full

Simple

Identification info

Alternate title
Krill microbiome
Date (Publication)
2019-04-09
Edition
1
Citation identifier
Dataset DOI

Title
Information and documentation - Digital object identifier system
Date (Publication)
2012-04-23
Citation identifier
ISO 26324:2012

Citation identifier
doi:10.26179/5cac34bd3481b

Originator

Deagle, B.E., King, R., Clarke, L.

Publisher

Australian Antarctic Data Centre

Principal investigator

DEAGLE, BRUCE E.
Australian Antarctic Division
203 Channel Highway
Kingston
Tasmania
7050
Australia
+61 3 6232 3174

Principal investigator

KING, ROB
Australian Antarctic Division
203 Channel Highway
Kingston
Tasmania
7050
Australia
+61 3 6232 3527

Principal investigator

CLARKE, LAURENCE
Australian Antarctic Division
203 Channel Highway
Kingston
Tasmania
7050
Australia
0424476441

Collaborator

DEAGLE, BRUCE E.
Australian Antarctic Division
203 Channel Highway
Kingston
Tasmania
7050
Australia
+61 3 6232 3174

Collaborator

KING, ROB
Australian Antarctic Division
203 Channel Highway
Kingston
Tasmania
7050
Australia
+61 3 6232 3527
Name
CAASM Metadata
Website
https://data.aad.gov.au/metadata/records/AAS_4313_KRILL_MICROBIOME

Purpose
To characterise the bacterial communities in different krill tissues, and compare them with those in the surrounding seawater.
Status
Completed

Custodian

AU/AADC > Australian Antarctic Data Centre, Australia - AADC, DATA OFFICER (DATA CENTER CONTACT)
Australian Antarctic Division
203 Channel Highway
Kingston
Tasmania
7050
Australia
+61 3 6232 3244
+61 3 6232 3351 (facsimile)
Topic category
  • Biota
  • Oceans

Extent

N
S
E
W


Extent

Description
Temporal Coverage

Temporal extent

TimePeriod
2016-01-31 2016-02-19

Extent

Description
Vertical Extent - Depth

Vertical element

Minimum value
0
Maximum value
80
Identifier
urn:x-ogc:def:cs:EPSG:6498
Name
Vertical CS. Axis: depth (D). Orientation: down. UoM: m.
Identifier
urn:x-ogc:def:axis:EPSG:113
Name
depth
Title
Antarctic Krill Are Reservoirs for Distinct Southern Ocean Microbial Communities.
Date (Publication)
2019
Citation identifier
9

Citation identifier
doi:10.3389/fmicb.2018.03226

Author

Clarke LJ, Suter L, King R, Bissett A and Deagle BE
Name
Front. Microbiol.
Issue identification
3226
NASA/GCMD Earth Science Keywords
  • EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/INVERTEBRATES > ARTHROPODS > CRUSTACEANS > EUPHAUSIIDS (KRILL)
Keywords
  • EUPHAUSIA SUPERBA
  • MICROBIOME
  • 16S RRNA
  • ILLUMINA MISEQ
NASA/GCMD Earth Science Keywords
  • ADS > Automated DNA Sequencer
NASA/GCMD Earth Science Keywords
  • R/V AA > R/V Aurora Australis
NASA/GCMD Earth Science Keywords
  • AMD/AU
  • AMD
  • CEOS
NASA/GCMD Earth Science Keywords
  • GEOGRAPHIC REGION > POLAR
  • OCEAN > SOUTHERN OCEAN > SOUTHERN KERGUELEN AXIS

Resource constraints

Use limitation
This metadata record is publicly available.

Resource constraints

Access constraints
licence
Other constraints
These data are publicly available for download from the provided URL.

Resource constraints

File type
Portable Network Graphic
Linkage
Creative Commons by Attribution logo

Title
Attribution 4.0 International (CC BY 4.0)
Website
https://creativecommons.org/licenses/by/4.0/legalcode

Legal code for Creative Commons by Attribution 4.0 International license

Use constraints
licence
Other constraints
This data set conforms to the CCBY Attribution License (http://creativecommons.org/licenses/by/4.0/). Please follow instructions listed in the citation reference provided at http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=AAS_4313_KRILL_MICROBIOME when using these data.
Language
English
Character encoding
UTF8

Distribution Information

Distributor

Distributor

AU/AADC > Australian Antarctic Data Centre, Australia - AADC, DATA OFFICER (DATA CENTER CONTACT)
Australian Antarctic Division
203 Channel Highway
Kingston
Tasmania
7050
Australia
+61 3 6232 3244
+61 3 6232 3351 (facsimile)

Distributor

Fees
Free
Planned available datetime
2019-04-09T00:00:00
Units of distribution
kb
Transfer size
493
Distribution format
  • csv, text, fasta

OnLine resource
GET DATA

Download the dataset

OnLine resource
PROJECT HOME PAGE

Public information for AAS project AAS_4313

OnLine resource
VIEW RELATED INFORMATION

Citation reference for this metadata record and dataset.

Resource lineage

Statement
Several fecal, stomach and digestive gland samples had low sequencing depth, and could have a high proportion of contaminant bacteria. See the article and supplementary material for more detail.
Hierarchy level
Dataset
Maintenance and update frequency
As needed
Maintenance note
2019-04-09 - record created by Laurence Clarke.

Metadata

Metadata identifier
string/AAS_4313_KRILL_MICROBIOME

Language
English
Character encoding
UTF8

Author

CLARKE, LAURENCE
Australian Antarctic Division
203 Channel Highway
Kingston
Tasmania
7050
Australia
0424476441

Sponsor

Australian Antarctic Division

Owner

AADC

Type of resource

Resource scope
Dataset

Alternative metadata reference

Title
gov.nasa.gsfc.gcmd
Citation identifier
659669a7-d11f-4057-865e-0b753ed217b4

Alternative metadata reference

Title
gov.nasa.gsfc.gcmd
Date (Last Revision)
2019-04-09T15:53:25

Identifier

Description
metadata.extraction_date

Alternative metadata reference

Title
gov.nasa.gsfc.gcmd
Citation identifier
8.6

Metadata linkage
http://data.aad.gov.au/metadata/records/AAS_4313_KRILL_MICROBIOME

Point of truth for the metadata record

Date info (Creation)
2019-04-09T00:00:00
Date info (Last Update)
2019-04-09

Metadata standard

Title
ISO 19115-3
Edition
2014
Other citation details
Version 1
Title
DIF to ISO 19115-1 Profile
 
 

Overviews

Spatial extent

N
S
E
W


Keywords


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Access to the record in catalogue
Read here the full details and access to the data.

Associated resources

Not available


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