TemperateReefBase Geonetwork Catalogue
Switching state space model for pygmy blue whale satellite tag derived locations
An R data file containing a hierarchical switching state-space model of pygmy blue whale Argos-collected telemetry data using the bsam package (see Jonsen (2016). Joint estimation over multiple individuals improves behavioural state inference from animal movement data. Scientific Reports 6: 20625.) in R. The model estimated location states for each individual at regular 3-h time intervals, accounting for measurement error in the irregularly observed Argos surface locations; and estimated the behavioural state associated with each location. Satellite tags were deployed on pygmy blue whales located in the Bonney Upwelling region, SA, between 7 January and 16 March 2015.
File can be opened in R (A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. URL https://www.R-project.org/ ) using the code: readRDS('bw_3h_ssm.RDS')
Simple
Identification info
- Alternate title
- Switching state space model for pygmy blue whale satellite tag derived locations
- Date (Publication)
- 2020-12-04
- Edition
- 1
- Citation identifier
-
Dataset DOI
- Title
- Information and documentation - Digital object identifier system
- Date (Publication)
- 2012-04-23
- Citation identifier
- ISO 26324:2012
- Citation identifier
- doi:10.26179/5e671120e52b4
Originator
Andrews-Goff, V., Double, M., Moller, L., Attard, C., Bilgmann, K., Jonsen, I. and Paton, D.
Publisher
Australian Antarctic Data Centre
Principal investigator
ANDREWS-GOFF, VIRGINIA
Australian Antarctic Division
203 Channel Highway
Kingston
Tasmania
7050
Australia
Principal investigator
Principal investigator
MOLLER, LUCIANA
Principal investigator
ATTARD, CATHERINE
Principal investigator
BILGMANN, KERSTIN
Principal investigator
JONSEN, IAN
Department of Biological Sciences
Macquarie University
Sydney
NSW 2109
Australia
Sydney
NSW 2109
Australia
Principal investigator
PATON, DAVE
Collaborator
ANDREWS-GOFF, VIRGINIA
Australian Antarctic Division
203 Channel Highway
Kingston
Tasmania
7050
Australia
- Name
- CAASM Metadata
- Purpose
- This dataset is described in: Moller LM, Attard CRM, Bilgmann K, Andrews-Goff V, Jonsen I, Paton D and Double MC submitted. Movements, occupancy and behaviour of pygmy blue whales (Balaenoptera musculus brevicauda) satellite tagged in the Great Southern Australian Coastal Upwelling System.
- Status
- Completed
Custodian
AU/AADC > Australian Antarctic Data Centre, Australia - AADC, DATA OFFICER (DATA CENTER CONTACT)
Australian Antarctic Division
203 Channel Highway
Kingston
Tasmania
7050
Australia
- Topic category
-
- Oceans
- Biota
Extent
N
S
E
W
))
Extent
- Description
- Temporal Coverage
Temporal extent
- TimePeriod
- 2015-01-07 2016-03-16
- Title
- Movements and behaviour of blue whales satellite tagged in an Australian upwelling system
- Date (Publication)
- 2020
- Citation identifier
- 10
- Citation identifier
- https://doi.org/10.1038/s41598-020-78143-2
Author
Moller LM, Attard CRM, Bilgmann K, Andrews-Goff V, Jonsen I, Paton D and Double MC
- Name
- Scientific Reports
- Issue identification
- 21165
- NASA/GCMD Earth Science Keywords
-
- EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/VERTEBRATES > MAMMALS > CETACEANS > BALEEN WHALES
- EARTH SCIENCE > BIOSPHERE > ECOLOGICAL DYNAMICS > SPECIES/POPULATION INTERACTIONS > USE/FEEDING HABITATS
- EARTH SCIENCE > CLIMATE INDICATORS > BIOSPHERIC INDICATORS > SPECIES MIGRATION
- EARTH SCIENCE > OCEANS > OCEAN CIRCULATION > UPWELLING/DOWNWELLING
- Keywords
-
- SATELLITE TELEMETRY
- NASA/GCMD Earth Science Keywords
-
- Computer > Computer
- NASA/GCMD Earth Science Keywords
-
- SATELLITES
- MODELS
- NASA/GCMD Earth Science Keywords
-
- CEOS
- AMD/AU
- AMD
- NASA/GCMD Earth Science Keywords
-
- OCEAN > INDIAN OCEAN > EASTERN INDIAN OCEAN
- GEOGRAPHIC REGION > POLAR
- OCEAN > INDIAN OCEAN > BONNEY UPWELLING
- OCEAN > INDIAN OCEAN > GREAT SOUTHERN AUSTRALIAN COASTAL UPWELLING SYSTEM
- OCEAN > INDIAN OCEAN
Resource constraints
- Use limitation
- This metadata record is publicly available.
Resource constraints
- Access constraints
- licence
- Other constraints
- These data are publicly available for download from the provided URL.
Resource constraints
- File type
- Portable Network Graphic
- Title
- Attribution 4.0 International (CC BY 4.0)
- Website
-
https://creativecommons.org/licenses/by/4.0/legalcode
Legal code for Creative Commons by Attribution 4.0 International license
- Use constraints
- licence
- Other constraints
- This data set conforms to the CCBY Attribution License (http://creativecommons.org/licenses/by/4.0/). Please follow instructions listed in the citation reference provided at http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=AAS_4101_pygmy_blue_whale_SSSM when using these data.
- Language
- English
- Character encoding
- UTF8
Distribution Information
Distributor
Distributor
AU/AADC > Australian Antarctic Data Centre, Australia - AADC, DATA OFFICER (DATA CENTER CONTACT)
Australian Antarctic Division
203 Channel Highway
Kingston
Tasmania
7050
Australia
Distributor
- Fees
- Free
- Planned available datetime
- 2020-12-04T00:00:00
- Units of distribution
- MB
- Transfer size
- 196
- Distribution format
-
- R
- OnLine resource
-
GET DATA > DIRECT DOWNLOAD
Download the dataset.
- OnLine resource
-
PROJECT HOME PAGE
Public information for AAS project AAS_4101
- OnLine resource
-
VIEW RELATED INFORMATION
Citation reference for this metadata record and dataset.
- Maintenance and update frequency
- As needed
- Maintenance note
- 2020-03-10 - record created by Virginia Andrews-Goff. 2020-12-05 - record updated by Dave Connell to publicly release the data.
Metadata
- Metadata identifier
- string/AAS_4101_pygmy_blue_whale_SSSM
- Language
- English
- Character encoding
- UTF8
Author
ANDREWS-GOFF, VIRGINIA
Australian Antarctic Division
203 Channel Highway
Kingston
Tasmania
7050
Australia
Sponsor
Australian Antarctic Division
Owner
AADC
Type of resource
- Resource scope
- Dataset
Alternative metadata reference
- Title
- gov.nasa.gsfc.gcmd
- Citation identifier
- 42d18072-461a-4bae-a098-4cfcd08ec1c7
Alternative metadata reference
- Title
- gov.nasa.gsfc.gcmd
- Date (Last Revision)
- 2020-12-04T10:27:16
Identifier
- Description
- metadata.extraction_date
Alternative metadata reference
- Title
- gov.nasa.gsfc.gcmd
- Citation identifier
- 8.6
- Metadata linkage
-
http://data.aad.gov.au/metadata/records/AAS_4101_pygmy_blue_whale_SSSM
Point of truth for the metadata record
- Date info (Creation)
- 2020-03-10T00:00:00
- Date info (Last Update)
- 2020-12-03
Metadata standard
- Title
- ISO 19115-3
- Edition
- 2014
- Other citation details
- Version 1
- Title
- DIF to ISO 19115-1 Profile
Overviews
Spatial extent
N
S
E
W
Provided by
Associated resources
Not available