Patterns of population genetic structure among Australian and South Pacific humpback whales

A spreadsheet detailing the analysis of humpback whale biopsy samples including the field:

Sample ID

Duplicate (notes field)

Location sample was taken

Collection date (UTC)

Collection latitude and longitude

Sex

Haplotype

DLOOP sequence

Microsatellite sequence

Single nucleotide polymorphism (SNP) markers

Simple

Identification info

Alternate title
Patterns of population genetic structure among Australian and South Pacific humpback whales
Date (Publication)
2017-09-13
Edition
1
Citation identifier
Dataset DOI

Title
Information and documentation - Digital object identifier system
Date (Publication)
2012-04-23
Citation identifier
ISO 26324:2012

Citation identifier
doi:10.4225/15/59b8be6553307

Originator

Schmitt, N.T., Polanowski, A. and Double, M.

Publisher

Australian Antarctic Data Centre

Principal investigator

SCHMITT, NATALIE T

Principal investigator

POLANOWSKI, ANDREA
Australian Antarctic Division
203 Channel Highway
Kingston
Tasmania
7050
Australia

Principal investigator

DOUBLE, MIKE
Australian Antarctic Division
203 Channel Highway
Kingston
Tasmania
7050
Australia

Collaborator

SCHMITT, NATALIE T

Collaborator

POLANOWSKI, ANDREA
Australian Antarctic Division
203 Channel Highway
Kingston
Tasmania
7050
Australia

Collaborator

DOUBLE, MIKE
Australian Antarctic Division
203 Channel Highway
Kingston
Tasmania
7050
Australia
Name
CAASM Metadata
Website
https://data.aad.gov.au/metadata/records/AAS_4101_humpback_population_structure_mixing

Purpose
By utilising both mitochondrial and nuclear genetic markers, the population structure and distribution of humpback whales that migrate to separate winter breeding grounds along the north-western and north-eastern coasts of Australia, and their interaction with the endangered populations of the South Pacific can be examined. Specifically, this dataset was used to look at population structure among putative breeding populations, the mixing of breeding populations on high latitude Antarctic feeding grounds and evidence for sex-specific migration along the eastern Australian migratory corridor.
Status
Completed

Custodian

AU/AADC > Australian Antarctic Data Centre, Australia - AADC, DATA OFFICER (DATA CENTER CONTACT)
Australian Antarctic Division
203 Channel Highway
Kingston
Tasmania
7050
Australia
Topic category
  • Biota
  • Oceans

Extent

N
S
E
W


Extent

Description
Temporal Coverage

Temporal extent

TimePeriod
2006-11-22 2011-01-16
Title
Low levels of genetic differentiation characterize Australian humpback whale (Megaptera novaeangliae) populations
Date (Publication)
2014
Citation identifier
30

Author

Schmitt, N.T., Double, M.C., Jarman, S.N., Gales, N., Marthick, J.R., Polanowski, A.M., Scott Baker, C., Steel, D., Jenner, K.C.S., Jenner, M.N. and Gales, R.
Name
Marine Mammal Science
Issue identification
1
Page
221-241
Title
Mixed-stock analysis of humpback whales (Megaptera novaeangliae) on Antarctic feeding grounds.
Date (Publication)
2014
Citation identifier
14

Author

Schmitt, N.T., Double, M.C., Baker, C.S., Gales, N., Childerhouse, S., Polanowski, A.M., Steel, D., Albertson, G., Olavarria, C., Garrigue, C. and Poole, M.
Name
J Cetacean Res Manage
Page
141-147
Title
Remote Antarctic feeding ground important for east Australian humpback whales.
Date (Publication)
2014
Citation identifier
161

Author

Constantine, R., Steel, D., Allen, J., Anderson, M., Andrews, O., Baker, C.S., Beeman, P., Burns, D., Charrassin, J.B., Childerhouse, S. and Double, M.
Name
Marine biology
Issue identification
5
Page
1087-1093
Title
Patterns of population genetic structure among Australian and South Pacific humpback whales (Megaptera novaeangliae)
Date (Publication)
2013

Author

Schmitt, N.T.

Publisher

Australian National University
Name
PhD Thesis
NASA/GCMD Earth Science Keywords
  • EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/VERTEBRATES > MAMMALS > CETACEANS > BALEEN WHALES
  • EARTH SCIENCE > HUMAN DIMENSIONS > ENVIRONMENTAL IMPACTS > CONSERVATION
  • EARTH SCIENCE > AGRICULTURE > ANIMAL SCIENCE > ANIMAL BREEDING AND GENETICS
  • EARTH SCIENCE > CLIMATE INDICATORS > BIOSPHERIC INDICATORS > SPECIES MIGRATION
Keywords
  • HUMPBACK WHALE
  • MICROSATELLITES
  • POPULATION GENETIC STRUCTURE
  • MIXED STOCK ANALYSIS
  • SINGLE NUCLEOTIDE POLYMORPHISMS
  • MITOCHONDRIAL DNA
NASA/GCMD Earth Science Keywords
  • ADS > Automated DNA Sequencer
NASA/GCMD Earth Science Keywords
  • FIELD INVESTIGATION
  • LABORATORY
NASA/GCMD Earth Science Keywords
  • AMD/AU
  • AMD
  • CEOS
NASA/GCMD Earth Science Keywords
  • GEOGRAPHIC REGION > POLAR
  • CONTINENT > ANTARCTICA
  • OCEAN > SOUTHERN OCEAN
  • CONTINENT > AUSTRALIA/NEW ZEALAND > AUSTRALIA

Resource constraints

Use limitation
This metadata record is publicly available.

Resource constraints

Access constraints
licence
Other constraints
These data are publicly available for download from the provided URL. Copies of three publications are available for download from the provided URL to AAD staff only.

Resource constraints

File type
Portable Network Graphic
Linkage
Creative Commons by Attribution logo

Title
Attribution 4.0 International (CC BY 4.0)
Website
https://creativecommons.org/licenses/by/4.0/legalcode

Legal code for Creative Commons by Attribution 4.0 International license

Use constraints
licence
Other constraints
The samples collected in 2010 detailed in this dataset were collected under the International Whaling Commission's (IWC) Southern Ocean Research Partnership (SORP). The IWC-SORP ethos is one of open collaboration, communication and data sharing. The Data User will acknowledge the use of the IWC SORP dataset by the following statement: Data provided by the International Whaling Commission's Southern Ocean Research Partnership were all based upon non-lethal samples collected under a protocol approved by the Australian Antarctic Program Animal Ethics Committee (AAPAEC). These data were provided by the Partnership for the purpose of collaborative investigation. This data set conforms to the CCBY Attribution License (http://creativecommons.org/licenses/by/4.0/). Please follow instructions listed in the citation reference provided at http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=AAS_4101_humpback_population_structure_mixing when using these data.
Language
English
Character encoding
UTF8

Distribution Information

Distributor

Distributor

AU/AADC > Australian Antarctic Data Centre, Australia - AADC, DATA OFFICER (DATA CENTER CONTACT)
Australian Antarctic Division
203 Channel Highway
Kingston
Tasmania
7050
Australia

Distributor

Fees
Word
Planned available datetime
2017-09-13T00:00:00
Units of distribution
kb
Transfer size
167
Distribution format
  • Excel

OnLine resource
GET DATA

Download the data

OnLine resource
PROJECT HOME PAGE

Public information for AAS project AAS_4101

OnLine resource
VIEW RELATED INFORMATION > PUBLICATIONS

Download copies of three of the referenced publications - AAD Staff Only

OnLine resource
VIEW RELATED INFORMATION

Citation reference for this metadata record and dataset.

Resource lineage

Statement
Australian Antarctic Data Centre Note, 2018-07-10: Original datasheet was reformatted to fit IPT Biodiversity.AQ standard. The new datasheet "humpbackWhales.csv" provides the dataset ID, decimal latitude and longitude, location, sex, occurrence, and date of event. The taxonomical organisation is provided to the lowest taxonomical rank that could be determined, after matched in WoRMS (World Register of Marine Species).
Hierarchy level
Dataset
Maintenance and update frequency
As needed
Maintenance note
2017-09-13 - record created by Virginia Andrews-Goff. 2018-07-10 - record updated by Dave Connell after a revised dataset was provided by Daniela Farias for GBIF/OBIS compliance,

Metadata

Metadata identifier
string/AAS_4101_humpback_population_structure_mixing

Language
English
Character encoding
UTF8

Author

ANDREWS-GOFF, VIRGINIA
Australian Antarctic Division
203 Channel Highway
Kingston
Tasmania
7050
Australia

Sponsor

Australian Antarctic Division

Owner

AADC

Type of resource

Resource scope
Dataset

Alternative metadata reference

Title
gov.nasa.gsfc.gcmd
Citation identifier
d03496fa-4d2b-48f0-99d0-fe0033367012

Alternative metadata reference

Title
gov.nasa.gsfc.gcmd
Date (Last Revision)
2021-11-17T12:22:29

Identifier

Description
metadata.extraction_date

Alternative metadata reference

Title
gov.nasa.gsfc.gcmd
Citation identifier
8.6

Metadata linkage
http://data.aad.gov.au/metadata/records/AAS_4101_humpback_population_structure_mixing

Point of truth for the metadata record

Date info (Creation)
2017-09-13T00:00:00
Date info (Last Update)
2018-07-10

Metadata standard

Title
ISO 19115-3
Edition
2014
Other citation details
Version 1
Title
DIF to ISO 19115-1 Profile
 
 

Overviews

Spatial extent

N
S
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W


Keywords


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